CRAN Package Check Results for Maintainer ‘Albart Coster <albart at dairyconsult.nl>’

Last updated on 2019-05-26 00:47:28 CEST.

Package NOTE
HaploSim 12
pedigree 12

Package HaploSim

Current CRAN status:

Version: 1.8.4
Check: R code for possible problems
Result: NOTE
    AssignQTL : <anonymous>: no visible global function definition for
     'rgamma'
    AssignSingleQTL: no visible global function definition for 'rgamma'
    ListQTL : <anonymous>: no visible global function definition for
     'rgamma'
    SampleBaseHaplotype: no visible global function definition for 'runif'
    SampleHaplotype: no visible global function definition for 'rpois'
    SampleHaplotype: no visible global function definition for 'runif'
    SampleHaplotype: no visible global function definition for 'rbinom'
    Undefined global functions or variables:
     rbinom rgamma rpois runif
    Consider adding
     importFrom("stats", "rbinom", "rgamma", "rpois", "runif")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Package pedigree

Current CRAN status:

Version: 1.4
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.4
Check: dependencies in R code
Result: NOTE
    Package in Depends field not imported from: 'reshape'
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.4
Check: R code for possible problems
Result: NOTE
    blup: no visible global function definition for 'model.matrix'
    blup: no visible global function definition for 'model.frame'
    blup: no visible global function definition for 'read.table'
    calcG: no visible global function definition for 'as'
    gblup: no visible global function definition for 'model.matrix'
    gblup: no visible global function definition for 'model.frame'
    Undefined global functions or variables:
     as model.frame model.matrix read.table
    Consider adding
     importFrom("methods", "as")
     importFrom("stats", "model.frame", "model.matrix")
     importFrom("utils", "read.table")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.4
Check: compiled code
Result: NOTE
    File ‘pedigree/libs/pedigree.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc