CRAN Package Check Results for Package apmsWAPP

Last updated on 2019-09-22 00:47:32 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 17.81 169.46 187.27 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 17.53 129.97 147.50 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 239.86 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 221.03 NOTE
r-devel-windows-ix86+x86_64 1.0 58.00 163.00 221.00 NOTE
r-patched-linux-x86_64 1.0 18.30 162.88 181.18 NOTE
r-patched-solaris-x86 1.0 329.00 NOTE
r-release-linux-x86_64 1.0 16.82 161.41 178.23 NOTE
r-release-windows-ix86+x86_64 1.0 36.00 171.00 207.00 NOTE
r-release-osx-x86_64 1.0 ERROR
r-oldrel-windows-ix86+x86_64 1.0 24.00 219.00 243.00 NOTE
r-oldrel-osx-x86_64 1.0 NOTE

Check Details

Version: 1.0
Check: R code for possible problems
Result: NOTE
    TSPM: no visible global function definition for 'glm'
    TSPM: no visible binding for global variable 'poisson'
    TSPM: no visible global function definition for 'hatvalues'
    TSPM: no visible global function definition for 'residuals'
    TSPM: no visible global function definition for 'deviance'
    TSPM: no visible global function definition for 'qchisq'
    TSPM: no visible global function definition for 'qf'
    TSPM: no visible global function definition for 'pf'
    TSPM: no visible global function definition for 'pchisq'
    TSPM: no visible global function definition for 'p.adjust'
    norm.inttable: no visible global function definition for 'median'
    norm.inttable : <anonymous>: no visible global function definition for
     'quantile'
    saint_permF: no visible global function definition for 'read.table'
    saint_permF: no visible global function definition for 'write.table'
    saint_permF: no visible global function definition for 'write.csv2'
    tspm_apms: no visible global function definition for 'read.table'
    varFilter : <anonymous>: no visible global function definition for
     'median'
    varFilter: no visible global function definition for 'median'
    varFilter: no visible global function definition for 'quantile'
    Undefined global functions or variables:
     deviance glm hatvalues median p.adjust pchisq pf poisson qchisq qf
     quantile read.table residuals write.csv2 write.table
    Consider adding
     importFrom("stats", "deviance", "glm", "hatvalues", "median",
     "p.adjust", "pchisq", "pf", "poisson", "qchisq", "qf",
     "quantile", "residuals")
     importFrom("utils", "read.table", "write.csv2", "write.table")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.0
Check: package dependencies
Result: ERROR
    Packages required but not available:
     'genefilter', 'Biobase', 'multtest', 'edgeR', 'DESeq', 'aroma.light'
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64