CRAN Package Check Results for Package hapassoc

Last updated on 2019-12-06 00:49:57 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2-8 4.16 36.11 40.27 NOTE
r-devel-linux-x86_64-debian-gcc 1.2-8 3.13 28.78 31.91 NOTE
r-devel-linux-x86_64-fedora-clang 1.2-8 47.84 NOTE
r-devel-linux-x86_64-fedora-gcc 1.2-8 47.18 NOTE
r-devel-windows-ix86+x86_64 1.2-8 10.00 84.00 94.00 NOTE
r-devel-windows-ix86+x86_64-gcc8 1.2-8 10.00 63.00 73.00 NOTE
r-patched-linux-x86_64 1.2-8 3.31 33.78 37.09 NOTE
r-patched-solaris-x86 1.2-8 67.90 NOTE
r-release-linux-x86_64 1.2-8 3.00 33.72 36.72 NOTE
r-release-windows-ix86+x86_64 1.2-8 8.00 101.00 109.00 NOTE
r-release-osx-x86_64 1.2-8 NOTE
r-oldrel-windows-ix86+x86_64 1.2-8 7.00 52.00 59.00 NOTE
r-oldrel-osx-x86_64 1.2-8 NOTE

Check Details

Version: 1.2-8
Check: R code for possible problems
Result: NOTE
    EMvar: no visible global function definition for 'model.matrix'
    RecodeHaplos: no visible global function definition for 'na.omit'
    RecodeHaplos: no visible global function definition for 'tail'
    anova.hapassoc: no visible global function definition for 'pchisq'
    handleMissings: no visible global function definition for 'na.omit'
    hapassoc: no visible global function definition for 'binomial'
    hapassoc: no visible global function definition for 'formula'
    hapassoc: no visible global function definition for 'glm'
    hapassoc : <anonymous>: no visible global function definition for 'glm'
    hapassoc: no visible global function definition for 'model.frame'
    hapassoc: no visible global function definition for 'model.matrix'
    hapassoc: no visible binding for global variable 'contrasts'
    hapassoc: no visible global function definition for 'glm.control'
    hapassoc : <anonymous>: no visible global function definition for
     'glm.control'
    probY: no visible global function definition for 'dbinom'
    probY: no visible global function definition for 'dpois'
    probY: no visible global function definition for 'dnorm'
    probY: no visible global function definition for 'dgamma'
    summary.hapassoc: no visible global function definition for 'pchisq'
    Undefined global functions or variables:
     binomial contrasts dbinom dgamma dnorm dpois formula glm glm.control
     model.frame model.matrix na.omit pchisq tail
    Consider adding
     importFrom("stats", "binomial", "contrasts", "dbinom", "dgamma",
     "dnorm", "dpois", "formula", "glm", "glm.control",
     "model.frame", "model.matrix", "na.omit", "pchisq")
     importFrom("utils", "tail")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.2-8
Check: compiled code
Result: NOTE
    File ‘hapassoc/libs/hapassoc.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc