CRAN Package Check Results for Package msm

Last updated on 2018-01-24 00:47:06 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.6.5 9.64 189.04 198.68 ERROR
r-devel-linux-x86_64-debian-gcc 1.6.5 7.46 141.37 148.83 ERROR
r-devel-linux-x86_64-fedora-clang 1.6.5 232.60 ERROR
r-devel-linux-x86_64-fedora-gcc 1.6.5 224.61 ERROR
r-devel-windows-ix86+x86_64 1.6.5 29.00 280.00 309.00 ERROR
r-patched-linux-x86_64 1.6.5 9.93 252.28 262.21 OK
r-patched-solaris-x86 1.6.5 441.20 OK
r-release-linux-x86_64 1.6.5 8.91 252.66 261.57 OK
r-release-windows-ix86+x86_64 1.6.5 25.00 409.00 434.00 OK
r-release-osx-x86_64 1.6.5 OK
r-oldrel-windows-ix86+x86_64 1.6.5 27.00 335.00 362.00 OK
r-oldrel-osx-x86_64 1.6.5 OK

Check Details

Version: 1.6.5
Check: examples
Result: ERROR
    Running examples in ‘msm-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: pearson.msm
    > ### Title: Pearson-type goodness-of-fit test
    > ### Aliases: pearson.msm
    > ### Keywords: models
    >
    > ### ** Examples
    >
    > psor.q <- rbind(c(0,0.1,0,0),c(0,0,0.1,0),c(0,0,0,0.1),c(0,0,0,0))
    > psor.msm <- msm(state ~ months, subject=ptnum, data=psor,
    + qmatrix = psor.q, covariates = ~ollwsdrt+hieffusn,
    + constraint = list(hieffusn=c(1,1,1),ollwsdrt=c(1,1,2)))
    > pearson.msm(psor.msm, timegroups=2, intervalgroups=2, covgroups=2)
    Error in `[<-`(`*tmp*`, , , timeqmata[, 2] == i, value = c(0.531498564518791, :
     (subscript) logical subscript too long
    Calls: pearson.msm
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.6.5
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    
    Error: processing vignette ‘msm-manual.Rnw’ failed with diagnostics:
     chunk 31
    Error in `[<-`(`*tmp*`, , , timeqmata[, 2] == i, value = structure(c(0.853614751131037, :
     (subscript) logical subscript too long
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64

Version: 1.6.5
Check: examples
Result: ERROR
    Running examples in ‘msm-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: pearson.msm
    > ### Title: Pearson-type goodness-of-fit test
    > ### Aliases: pearson.msm
    > ### Keywords: models
    >
    > ### ** Examples
    >
    > psor.q <- rbind(c(0,0.1,0,0),c(0,0,0.1,0),c(0,0,0,0.1),c(0,0,0,0))
    > psor.msm <- msm(state ~ months, subject=ptnum, data=psor,
    + qmatrix = psor.q, covariates = ~ollwsdrt+hieffusn,
    + constraint = list(hieffusn=c(1,1,1),ollwsdrt=c(1,1,2)))
    > pearson.msm(psor.msm, timegroups=2, intervalgroups=2, covgroups=2)
    Error in `[<-`(`*tmp*`, , , timeqmata[, 2] == i, value = c(0.531498564518791, :
     (subscript) logical subscript too long
    Calls: pearson.msm
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.6.5
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'msm-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: pearson.msm
    > ### Title: Pearson-type goodness-of-fit test
    > ### Aliases: pearson.msm
    > ### Keywords: models
    >
    > ### ** Examples
    >
    > psor.q <- rbind(c(0,0.1,0,0),c(0,0,0.1,0),c(0,0,0,0.1),c(0,0,0,0))
    > psor.msm <- msm(state ~ months, subject=ptnum, data=psor,
    + qmatrix = psor.q, covariates = ~ollwsdrt+hieffusn,
    + constraint = list(hieffusn=c(1,1,1),ollwsdrt=c(1,1,2)))
    > pearson.msm(psor.msm, timegroups=2, intervalgroups=2, covgroups=2)
    Error in `[<-`(`*tmp*`, , , timeqmata[, 2] == i, value = c(0.53149856682426, :
     (subscript) logical subscript too long
    Calls: pearson.msm
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.6.5
Check: running examples for arch ‘x64’
Result: ERROR
    Running examples in 'msm-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: pearson.msm
    > ### Title: Pearson-type goodness-of-fit test
    > ### Aliases: pearson.msm
    > ### Keywords: models
    >
    > ### ** Examples
    >
    > psor.q <- rbind(c(0,0.1,0,0),c(0,0,0.1,0),c(0,0,0,0.1),c(0,0,0,0))
    > psor.msm <- msm(state ~ months, subject=ptnum, data=psor,
    + qmatrix = psor.q, covariates = ~ollwsdrt+hieffusn,
    + constraint = list(hieffusn=c(1,1,1),ollwsdrt=c(1,1,2)))
    > pearson.msm(psor.msm, timegroups=2, intervalgroups=2, covgroups=2)
    Error in `[<-`(`*tmp*`, , , timeqmata[, 2] == i, value = c(0.531498564518791, :
     (subscript) logical subscript too long
    Calls: pearson.msm
    Execution halted
Flavor: r-devel-windows-ix86+x86_64