CRAN Package Check Results for Package sigminer

Last updated on 2019-07-24 00:47:43 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.11 10.74 139.93 150.67 OK
r-devel-linux-x86_64-debian-gcc 0.1.11 8.02 108.61 116.63 OK
r-devel-linux-x86_64-fedora-clang 0.1.11 178.50 OK
r-devel-linux-x86_64-fedora-gcc 0.1.11 165.74 OK
r-devel-windows-ix86+x86_64 0.1.11 26.00 138.00 164.00 OK
r-patched-linux-x86_64 0.1.11 8.89 133.07 141.96 OK
r-patched-solaris-x86 0.1.11 229.90 WARN
r-release-linux-x86_64 0.1.11 10.46 133.69 144.15 OK
r-release-windows-ix86+x86_64 0.1.11 19.00 133.00 152.00 OK
r-release-osx-x86_64 0.1.11 ERROR
r-oldrel-windows-ix86+x86_64 0.1.11 28.00 206.00 234.00 OK
r-oldrel-osx-x86_64 0.1.11 ERROR

Check Details

Version: 0.1.11
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘sigminer.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    stdin: not in compressed format
    Quitting from lines 59-61 (sigminer.Rmd)
    Error: processing vignette 'sigminer.Rmd' failed with diagnostics:
    missing required fields from MAF: Hugo_Symbol
    --- failed re-building ‘sigminer.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘sigminer.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.1.11
Check: package dependencies
Result: ERROR
    Package required but not available: ‘maftools’
    
    Packages suggested but not available for checking:
     'BSgenome', 'BSgenome.Hsapiens.UCSC.hg19'
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64

Version: 0.1.11
Check: package dependencies
Result: ERROR
    Package required but not available: ‘maftools’
    
    Packages suggested but not available for checking:
     ‘BSgenome’ ‘BSgenome.Hsapiens.UCSC.hg19’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-oldrel-osx-x86_64