CRAN Package Check Results for Maintainer ‘Thomas Lin Pedersen <thomasp85 at gmail.com>’

Last updated on 2019-05-26 00:47:59 CEST.

Package ERROR WARN NOTE OK
ambient 12
curry 12
densityClust 12
farver 12
fiery 12
gganimate 1 11
ggforce 1 5 6
ggraph 6 6
hierarchicalSets 12
lime 1 3 8
particles 5 7
reqres 12
routr 5 7
scico 12
shinyFiles 12
tidygraph 1 11
transformr 12
tweenr 12

Package ambient

Current CRAN status: OK: 12

Additional issues

clang-UBSAN gcc-UBSAN

Package curry

Current CRAN status: OK: 12

Package densityClust

Current CRAN status: OK: 12

Package farver

Current CRAN status: OK: 12

Package fiery

Current CRAN status: OK: 12

Package gganimate

Current CRAN status: ERROR: 1, OK: 11

Version: 1.0.3
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: 'av', 'gifski'
Flavor: r-patched-solaris-x86

Version: 1.0.3
Check: tests
Result: ERROR
     Running ‘testthat.R’
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(gganimate)
     Loading required package: ggplot2
     >
     > test_check("gganimate")
     ── 1. Error: anim_save overwrites existing files (@test-anim_save.R#8) ────────
     The `gifski_renderer()` is selected by default but requires the gifski
     package to be installed. Either install gifski or use another renderer.
     See `?renderers` for a list of available ones.
     1: capture.output({
     a1 <- animate(p, nframes = 2)
     a2 <- animate(p, nframes = 3)
     }) at testthat/test-anim_save.R:8
     2: evalVis(expr)
     3: withVisible(eval(expr, pf))
     4: eval(expr, pf)
     5: eval(expr, pf)
     6: animate(p, nframes = 2)
     7: animate.gganim(p, nframes = 2)
     8: prepare_args(nframes = nframes, fps = fps, duration = duration, detail = detail,
     renderer = renderer, device = device, ref_frame = ref_frame, start_pause = start_pause,
     end_pause = end_pause, rewind = rewind, ...)
     9: renderer %?% chunk_args$renderer %||% getOption("gganimate.renderer", gifski_renderer())
     10: getOption("gganimate.renderer", gifski_renderer())
     11: gifski_renderer()
     12: stop("The `gifski_renderer()` is selected by default but requires the gifski\n",
     "package to be installed. Either install gifski or use another renderer.\n",
     "See `?renderers` for a list of available ones.", call. = FALSE)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 6 SKIPPED: 0 WARNINGS: 0 FAILED: 1
     1. Error: anim_save overwrites existing files (@test-anim_save.R#8)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86

Version: 1.0.3
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘gganimate.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 51-57 (gganimate.Rmd)
    Error: processing vignette 'gganimate.Rmd' failed with diagnostics:
    The `gifski_renderer()` is selected by default but requires the gifski
    package to be installed. Either install gifski or use another renderer.
    See `?renderers` for a list of available ones.
    --- failed re-building ‘gganimate.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘gganimate.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Package ggforce

Current CRAN status: WARN: 1, NOTE: 5, OK: 6

Version: 0.2.2
Check: installed package size
Result: NOTE
     installed size is 21.5Mb
     sub-directories of 1Mb or more:
     doc 2.9Mb
     libs 17.7Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.2.2
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: S3 methods '[.fun_list', '[.grouped_df', 'all.equal.tbl_df', 'anti_join.data.frame', 'anti_join.tbl_df', 'arrange.data.frame', 'arrange.default', 'arrange.grouped_df', 'arrange.tbl_df', 'arrange_.data.frame', 'arrange_.tbl_df', 'as.data.frame.grouped_df', 'as.data.frame.rowwise_df', 'as.data.frame.tbl_cube', 'as.table.tbl_cube', 'as.tbl.data.frame', 'as.tbl.tbl', 'as.tbl_cube.array', 'as.tbl_cube.data.frame', 'as.tbl_cube.matrix', 'as.tbl_cube.table', 'as_tibble.grouped_df', 'as_tibble.tbl_cube', 'auto_copy.tbl_cube', 'auto_copy.tbl_df', 'cbind.grouped_df', 'collapse.data.frame', 'collect.data.frame', 'common_by.NULL', 'common_by.character', 'common_by.default', 'common_by.list', 'compute.data.frame', 'copy_to.DBIConnection', 'copy_to.src_local', 'default_missing.data.frame', 'default_missing.default', 'dim.tbl_cube', 'distinct.data.frame', 'distinct.default', 'distinct.grouped_df', 'distinct.tbl_df', 'distinct_.data.frame', 'distinct_.grouped_df', 'distinct_.tbl_df', 'do.NULL', 'do.da [... truncated]
Flavor: r-oldrel-windows-ix86+x86_64

Package ggraph

Current CRAN status: NOTE: 6, OK: 6

Version: 1.0.2
Check: installed package size
Result: NOTE
     installed size is 6.0Mb
     sub-directories of 1Mb or more:
     doc 3.0Mb
     libs 2.0Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Package hierarchicalSets

Current CRAN status: NOTE: 12

Version: 1.0.2
Check: dependencies in R code
Result: NOTE
    Unexported objects imported by ':::' calls:
     'ggplot2:::build_guides' 'ggplot2:::guide_axis'
     'ggplot2:::scales_list'
     See the note in ?`:::` about the use of this operator.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.0.2
Check: compiled code
Result: NOTE
    File ‘hierarchicalSets/libs/hierarchicalSets.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Package lime

Current CRAN status: ERROR: 1, WARN: 3, OK: 8

Version: 0.4.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘xgboost’
Flavor: r-patched-solaris-x86

Version: 0.4.1
Check: examples
Result: ERROR
    Running examples in ‘lime-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: interactive_text_explanations
    > ### Title: Interactive explanations
    > ### Aliases: interactive_text_explanations text_explanations_output
    > ### render_text_explanations
    >
    > ### ** Examples
    >
    > library(text2vec)
    > library(xgboost)
    Error in library(xgboost) : there is no package called ‘xgboost’
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.4.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [19s/82s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(lime)
     >
     > test_check("lime")
    
     H2O is not running yet, starting it now...
    
     Note: In case of errors look at the following log files:
     /tmp/RtmpOkaOUB/h2o_ripley_started_from_r.out
     /tmp/RtmpOkaOUB/h2o_ripley_started_from_r.err
    
     java version "1.7.0_65"
     Java(TM) SE Runtime Environment (build 1.7.0_65-b17)
     Java HotSpot(TM) Server VM (build 24.65-b04, mixed mode)
    
     Starting H2O JVM and connecting: ...... Connection successful!
    
     R is connected to the H2O cluster:
     H2O cluster uptime: 8 seconds 676 milliseconds
     H2O cluster timezone: Europe/London
     H2O data parsing timezone: UTC
     H2O cluster version: 3.22.1.1
     H2O cluster version age: 4 months and 25 days !!!
     H2O cluster name: H2O_started_from_R_ripley_tjq003
     H2O cluster total nodes: 1
     H2O cluster total memory: 0.89 GB
     H2O cluster total cores: 16
     H2O cluster allowed cores: 16
     H2O cluster healthy: TRUE
     H2O Connection ip: localhost
     H2O Connection port: 54321
     H2O Connection proxy: NA
     H2O Internal Security: FALSE
     H2O API Extensions: AutoML, Algos, Core V3, Core V4
     R Version: R version 3.6.0 Patched (2019-05-22 r76580)
    
     ── 1. Error: (unknown) (@test-text.R#3) ───────────────────────────────────────
     there is no package called 'xgboost'
     1: library(xgboost) at testthat/test-text.R:3
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     OK: 18 SKIPPED: 0 WARNINGS: 1 FAILED: 1
     1. Error: (unknown) (@test-text.R#3)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86

Version: 0.4.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘Understanding_lime.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 185-224 (Understanding_lime.Rmd)
    Error: processing vignette 'Understanding_lime.Rmd' failed with diagnostics:
    there is no package called 'xgboost'
    --- failed re-building ‘Understanding_lime.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘Understanding_lime.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.4.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘Understanding_lime.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 262-263 (Understanding_lime.Rmd)
    Error: processing vignette 'Understanding_lime.Rmd' failed with diagnostics:
    cannot open the connection
    --- failed re-building ‘Understanding_lime.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘Understanding_lime.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 0.4.1
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: S3 methods '[.fun_list', '[.grouped_df', 'all.equal.tbl_df', 'anti_join.data.frame', 'anti_join.tbl_df', 'arrange.data.frame', 'arrange.default', 'arrange.grouped_df', 'arrange.tbl_df', 'arrange_.data.frame', 'arrange_.tbl_df', 'as.data.frame.grouped_df', 'as.data.frame.rowwise_df', 'as.data.frame.tbl_cube', 'as.table.tbl_cube', 'as.tbl.data.frame', 'as.tbl.tbl', 'as.tbl_cube.array', 'as.tbl_cube.data.frame', 'as.tbl_cube.matrix', 'as.tbl_cube.table', 'as_tibble.grouped_df', 'as_tibble.tbl_cube', 'auto_copy.tbl_cube', 'auto_copy.tbl_df', 'cbind.grouped_df', 'collapse.data.frame', 'collect.data.frame', 'common_by.NULL', 'common_by.character', 'common_by.default', 'common_by.list', 'compute.data.frame', 'copy_to.DBIConnection', 'copy_to.src_local', 'default_missing.data.frame', 'default_missing.default', 'dim.tbl_cube', 'distinct.data.frame', 'distinct.default', 'distinct.grouped_df', 'distinct.tbl_df', 'distinct_.data.frame', 'distinct_.grouped_df', 'distinct_.tbl_df', 'do.NULL', 'do.da [... truncated]
Flavor: r-oldrel-windows-ix86+x86_64

Version: 0.4.1
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 262-263 (Understanding_lime.Rmd)
    Error: processing vignette 'Understanding_lime.Rmd' failed with diagnostics:
    cannot open the connection
    Execution halted
Flavor: r-oldrel-osx-x86_64

Package particles

Current CRAN status: NOTE: 5, OK: 7

Version: 0.2.2
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘dplyr’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package reqres

Current CRAN status: OK: 12

Package routr

Current CRAN status: NOTE: 5, OK: 7

Version: 0.3.0
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘httpuv’ ‘utils’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Package scico

Current CRAN status: OK: 12

Package shinyFiles

Current CRAN status: OK: 12

Package tidygraph

Current CRAN status: NOTE: 1, OK: 11

Version: 1.1.2
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘graph’
Flavor: r-release-osx-x86_64

Package transformr

Current CRAN status: OK: 12

Package tweenr

Current CRAN status: OK: 12