CRAN Package Check Results for Maintainer ‘Derek Corcoran <derek.corcoran.barrios at gmail.com>’

Last updated on 2024-07-24 00:54:17 CEST.

Package NOTE OK
AICcPermanova 2 11
NetworkExtinction 10 3
TroublemakeR 13

Package AICcPermanova

Current CRAN status: NOTE: 2, OK: 11

Version: 0.0.2
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: AICc_permanova2.Rd: adonis2 fit_models.Rd: vegdist, adonis2 Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Package NetworkExtinction

Current CRAN status: NOTE: 10, OK: 3

Version: 1.0.3
Check: Rd files
Result: NOTE checkRd: (-1) ExtinctionOrder.Rd:35: Lost braces 35 | \item{RewiringDist}{a numeric matrix of NxN dimension (N... number of nodes in Network). Contains, for example, phylogenetic or functional trait distances between nodes in Network which are used by the Rewiring argument to calculate rewiring probabilities. If Rewiring == function(x){x}, this matrix is expected to contain probabilities of a connection being present between species-pairs.} | ^ checkRd: (-1) RandomExtinctions.Rd:52: Lost braces 52 | \item{RewiringDist}{a numeric matrix of NxN dimension (N... number of nodes in Network). Contains, for example, phylogenetic or functional trait distances between nodes in Network which are used by the Rewiring argument to calculate rewiring probabilities. If Rewiring == function(x){x}, this matrix is expected to contain probabilities of a connection being present between species-pairs.} | ^ checkRd: (-1) RandomExtinctions.Rd:71-72: Lost braces 71 | primary removals. For example, if a network has five species {A,B, | ^ checkRd: (-1) RandomExtinctions.Rd:72: Lost braces; missing escapes or markup? 72 | ,D,E} and a pre-defined "random" order of removal {C,A,B,E,D} with | ^ checkRd: (-1) RandomExtinctions.Rd:77: Lost braces; missing escapes or markup? 77 | vector, i.e., {C,A,B}." | ^ checkRd: (-1) SimulateExtinctions.Rd:38: Lost braces 38 | \item{RewiringDist}{a numeric matrix of NxN dimension (N... number of nodes in Network). Contains, for example, phylogenetic or functional trait distances between nodes in Network which are used by the Rewiring argument to calculate rewiring probabilities. If Rewiring == function(x){x}, this matrix is expected to contain probabilities of a connection being present between species-pairs.} | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Package TroublemakeR

Current CRAN status: OK: 13