Visualising publication activity per gene based on a gene list and a user-defined set of keywords utilising R 'rentrez' <https://cran.r-project.org/package=rentrez/> that provides 'NCBI' <https://www.ncbi.nlm.nih.gov> database search like in 'PubMed' <https://pubmed.ncbi.nlm.nih.gov>. It summarises the retrieved number of publications for each gene in an overview bar plot (saved as 'png' file) and by choice a summary table (as 'csv') that including the most recent 100 'PubMed' IDs and publication titles.
| Version: | 1.2.0 |
| Depends: | R (≥ 2.10) |
| Imports: | rentrez (≥ 1.2.3), biomartr (≥ 1.0.2), grDevices (≥ 4.2.0), graphics (≥ 4.2.0), utils (≥ 4.2.0) |
| Suggests: | knitr, rmarkdown, testthat (≥ 3.0.0) |
| Published: | 2023-10-31 |
| Author: | Marina Leer [aut, cre, cph], George Soultoukis [ctb], Masoome Oveisi [ctb], German Research Foundation [fnd], German Ministry of Education and Research [fnd], State of Brandenburg [fnd] |
| Maintainer: | Marina Leer <marina.leer at dife.de> |
| License: | GPL (≥ 3) |
| NeedsCompilation: | no |
| CRAN checks: | GeSciLiVis results |
| Reference manual: | GeSciLiVis.pdf |
| Vignettes: |
Getting_started_with_GeSciLiVis |
| Package source: | GeSciLiVis_1.2.0.tar.gz |
| Windows binaries: | r-devel: GeSciLiVis_1.2.0.zip, r-release: GeSciLiVis_1.2.0.zip, r-oldrel: GeSciLiVis_1.2.0.zip |
| macOS binaries: | r-release (arm64): GeSciLiVis_1.2.0.tgz, r-oldrel (arm64): GeSciLiVis_1.2.0.tgz, r-release (x86_64): GeSciLiVis_1.2.0.tgz, r-oldrel (x86_64): not available |
| Old sources: | GeSciLiVis archive |
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