Routines to handle family data with a pedigree object. The initial purpose was to create correlation structures that describe family relationships such as kinship and identity-by-descent, which can be used to model family data in mixed effects models, such as in the coxme function. Also includes a tool for pedigree drawing which is focused on producing compact layouts without intervention. Recent additions include utilities to trim the pedigree object with various criteria, and kinship for the X chromosome.
|Depends:||R (≥ 3.6.0), Matrix, quadprog|
|Imports:||graphics, stats, methods, knitr|
|Author:||Jason Sinnwell [aut, cre], Terry Therneau [aut], Daniel Schaid [ctb], Elizabeth Atkinson [ctb], Carly Mester [ctb]|
|Maintainer:||Jason Sinnwell <sinnwell.jason at mayo.edu>|
|License:||GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]|
|In views:||Agriculture, MixedModels|
|CRAN checks:||kinship2 results|
|Windows binaries:||r-devel: kinship2_1.9.6.zip, r-release: kinship2_1.9.6.zip, r-oldrel: kinship2_1.9.6.zip|
|macOS binaries:||r-release (arm64): kinship2_1.9.6.tgz, r-oldrel (arm64): kinship2_1.9.6.tgz, r-release (x86_64): kinship2_1.9.6.tgz, r-oldrel (x86_64): kinship2_1.9.6.tgz|
|Old sources:||kinship2 archive|
|Reverse depends:||ElstonStewart, FamAgg, GESE, MasterBayes, pedgene|
|Reverse imports:||FamEvent, famSKATRC, fat2Lpoly, GENLIB, LCAextend, LRQMM, Mega2R, MESS, optiSel, paramlink, pedtools, ribd, RVS, SimRVPedigree, skater|
|Reverse suggests:||coxme, gap, Mangrove, pbatR, pedmod, sequoia, simfam|
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