plinkFile: 'PLINK' (and 'GCTA') File Helpers

Reads/write binary genotype file compatible with 'PLINK' <> into/from a R matrix; traverse genotype data one windows of variants at a time, like apply() or a for loop; reads/writes genotype relatedness/kinship matrices created by 'PLINK' <> or 'GCTA' <> into/from a R square matrix. It is best used for bringing data produced by 'PLINK' and 'GCTA' into R workflow.

Version: 0.2.1
Depends: R (≥ 3.5.0)
Published: 2023-11-24
DOI: 10.32614/CRAN.package.plinkFile
Author: Xiaoran Tong [aut, cre]
Maintainer: Xiaoran Tong < at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: no
CRAN checks: plinkFile results


Reference manual: plinkFile.pdf


Package source: plinkFile_0.2.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): plinkFile_0.2.1.tgz, r-oldrel (arm64): plinkFile_0.2.1.tgz, r-release (x86_64): plinkFile_0.2.1.tgz, r-oldrel (x86_64): plinkFile_0.2.1.tgz
Old sources: plinkFile archive


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